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A small molecule inhibitor of NVL suppresses tumor growth by blocking ribosome biogenesis
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A small molecule inhibitor of NVL suppresses tumor growth by blocking ribosome biogenesis

Holly H. Guo, Ye Tao, Victor E. Cruz +12 more
August 2025
 ·
bioRxiv
 ·
DOI 
10.1101/2025.07.31.667081
94
%
Reproducible
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This paper passed independent validation.
QED's automated review checked the evidence supporting each claim, the statistical methods, and whether the results are reproducible from the data provided.

It ranks in the top 1% of preprints assessed in Biochemistry this quarter.
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Why this is interesting

By developing first-in-class inhibitors of the ribosome assembly factor NVL, this work validates a decades-long hypothesis that cancer's dependence on ribosome biogenesis is a targetable vulnerability—and proves it can be exploited without genotoxicity.

QED claims analysis

Summary

The dibenzothiazepinone MM17 and its bioavailable analog MM927 selectively inhibit the AAA+ ATPase NVL by binding to specific sites within the hexameric assembly, thereby blocking 60S ribosomal subunit maturation in the nucleolus and inducing cell cycle arrest through both p53-dependent and p53-independent pathways without causing DNA damage, ultimately suppressing tumor growth in mouse models of colorectal cancer and leukemia without observable toxicity.

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Main Claim 1 –

NVL Is the Direct Molecular Target of MM17

Supporting evidence

  • MM17 Directly Binds NVL; Resistance Mutations Reduce Binding
  • MM17 Binds Two NVL Hexamer Sites Near Resistance Mutations
Main Claim 2 –

MM17 Blocks Nucleolar 60S Ribosomal Subunit Biogenesis

Supporting evidence

  • MM17 Phenocopies NVL Depletion in Polysome Profiling Signatures
Main Claim 3 –

NVL Inhibition Triggers p53-Dependent and p53-Independent Cell Cycle Arrest

Supporting evidence

  • TP53 and CDKN1A Knockouts Most Strongly Confer MM17 Resistance
  • MM17 Activates p53 via the Impaired Ribosome Biogenesis Checkpoint
Main Claim 4 –

MM927 Suppresses Mouse Tumor Growth Without Observable Toxicity

Supporting evidence

  • MM927 Is a Bioavailable, More Potent MM17 Analog
  • NVL Inhibition Shows Cross-Cancer Efficacy with Cell-Type-Specific Responses
  • NVL Inhibitors Block Ribosome Biogenesis Without Inducing DNA Damage
  • MM17 Activity Profiles Correlate with 5-FU and Oxaliplatin

Abstract

A longstanding hypothesis, stemming from the enlarged nucleoli typical of cancer cells, posits ribosome production as a selective cancer liability. Certain genotoxic chemotherapies work partly by disrupting ribosome biogenesis, highlighting the need for selective inhibitors of this pathway. Using forward genetics, we identified mutations in the essential 60S ribosomal subunit assembly factor NVL that confer resistance to MM17, a dibenzothiazepinone with anticancer activity. Cryo-EM reconstructions of the NVL hexameric assembly reveal two MM17 docking sites adjacent to resistance mutations. NVL inhibition by MM17 arrests 60S biogenesis in the nucleolus and induces cell cycle arrest or apoptosis through both MDM2/p53-dependent and p53-independent pathways, without causing DNA damage. A bioavailable analog, MM927, suppresses tumor growth in mouse models of leukemia and colorectal cancer without observable toxicity. These findings establish NVL inhibitors as a promising new class of targeted therapeutics and validate ribosome biogenesis as a cancer-specific vulnerability.

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