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Sex without crossovers mimics clonal reproduction in the holocentric plant Rhynchospora tenuis
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Sex without crossovers mimics clonal reproduction in the holocentric plant Rhynchospora tenuis

Meng Zhang, Marco Castellani, Stefan Steckenborn +23 more
January 2026
 ·
bioRxiv
 ·
DOI 
10.64898/2026.01.17.700054
94
%
Reproducible
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It ranks in the top 1% of preprints assessed in Evolutionary Biology this quarter.
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Why this is interesting

Overturning the assumed universality of meiotic recombination, this paper documents obligate bisexual achiasmy in a sexually reproducing plant, revealing how genome architecture and post-meiotic selection produce clonal-like inheritance through sex.

Author perspective

What is the most important insight, discovery, or finding from your paper that you would like other scientists to know?
“

The key message is that sexual reproduction can persist even after the apparent loss of meiotic recombination. We discovered a remarkable reproductive system in which meiosis and fertilisation are retained, yet entire parental haplotypes are transmitted intact across generations through a combination of achiasmy, meiotic drive, and post-meiotic selection. This blurs the traditional boundary between sex and clonality and reveals an unexpected evolutionary route by which genomes can remain stable without crossovers.

”
André Marques

QED claims analysis

Summary

The holocentric plant Rhynchospora tenuis has evolved obligate bisexual achiasmy—complete absence of meiotic recombination in both sexes—yet maintains sexual reproduction through a unique system combining inverted meiosis, extreme meiotic drive favoring larger TE-rich chromosomes, and strong post-meiotic selection that eliminates incompatible gamete combinations, resulting in offspring that genetically mirror the maternal genotype despite biparental inheritance and effectively blurring the boundary between sexual and clonal reproduction.

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Main Claim 1 –

Stepwise chromosome fusions reduced R. tenuis to n=2

Supporting evidence

  • Terminal reciprocal translocations vary by population and are FISH-validated
  • Holocentromeres are H3K4me3-enriched and CpG-hypomethylated in R. tenuis
Main Claim 2 –

Meselson-like haplotype divergence driven by transposable element accumulation

Supporting evidence

  • Haplotype divergence dates to 0.23–1.7 million years ago
Main Claim 3 –

Obligate achiasmatic inverted meiosis with failed pairing and synapsis

Supporting evidence

  • R. austrobrasiliensis shows normal synapsis and chiasmatic crossovers
  • Core meiotic genes retained, with ASY1 and MSH5 copy variation
Main Claim 4 –

Zero crossovers detected in male and female meiosis

Abstract

Meiotic recombination ensures accurate chromosome segregation and promotes genetic diversity by generating crossovers between homologous chromosomes. While essential in most sexually reproducing organisms, recombination is variably regulated and can be absent in some lineages, a condition known as achiasmy. However, obligate achiasmy in both sexes of a sexual species has not been previously documented. Here, we investigate the beak-sedge Rhynchospora tenuis, a holocentric plant with the lowest known chromosome number among flowering plants (n = 2) and inverted meiosis. Using chromosome-scale genome assemblies from nine accessions, molecular cytogenetics, immunocytochemistry, high-throughput single-gamete sequencing and whole-genome sequencing of controlled crosses, we show that R. tenuis undergoes obligate, genome-wide achiasmy in both male and female meiosis. Despite normal early meiotic axis formation, synapsis fails, crossovers are not detected cytologically or genetically, and univalents persist at metaphase I. Extensive haplotype-specific accumulation of transposable elements (TEs) generates segregation distortion (e.g. meiotic drive), favouring the transmission of larger, TE-rich chromosomes. Remarkably, sexual reproduction is retained with fertilisation producing viable seeds only when translocation-compatible gametes meet, indicating strong post-meiotic selection that eliminates incompatible homozygous combinations. As a result, all surviving offspring are genetically identical to the maternal genotype, effectively restoring heterozygosity each generation and mimicking clonal reproduction. We propose that the combined effects of recombination loss, low chromosome number, holocentricity, inverted meiosis, and selective transmission of longer chromosomes enable faithful segregation and clonal-like inheritance despite sexual reproduction. These findings challenge the boundary between sex and clonality, revealing a unique evolutionary strategy linking genome architecture, recombination loss, and transmission bias.

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