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Emergence of Functional Heart-Brain Circuits in a Vertebrate
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Emergence of Functional Heart-Brain Circuits in a Vertebrate

L. Hernandez-Nunez, J. Avrami, S. Shi +8 more
December 2025
 ·
bioRxiv
 ·
DOI 
10.1101/2025.09.22.677693
94
%
Reproducible
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It ranks in the top 1% of preprints assessed in Neuroscience this quarter.
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Why this is interesting

Tracking cardiac autonomic assembly in living zebrafish, this work overturns the assumed necessity of intracardiac ganglia for vagal control, identifies PID-like computation in individual sympathetic neurons, and establishes a cellular framework for heart-brain circuit dissection.

Author perspective

What is the most important insight, discovery, or finding from your paper that you would like other scientists to know?
“

The most important insight from our paper is that heart–brain communication emerges through a staged developmental program that can be observed and perturbed in vivo. Using larval zebrafish, we show that cardiac regulation begins with a minimal direct brain-to-heart vagal motor circuit, is later enhanced by sympathetic neurons with controller-like dynamics, and finally becomes a closed-loop system when vagal sensory neurons begin reporting heart-rate dynamics back to the brain. More broadly, our work establishes zebrafish as a powerful vertebrate model for studying brain–body interactions at cellular resolution in intact animals.

”
L. Hernandez-Nunez

QED claims analysis

Summary

Heart-brain autonomic circuits assemble through a staged developmental program in which direct vagal motor innervation establishes minimal cardiac control before intracardiac neurons arrive, sympathetic inputs subsequently add proportional-integral-derivative control motifs that shape response dynamics, and vagal sensory neurons implement a stimulus-invariant population code for heart rate through phase-shifted canonical kernels that enable robust interoceptive feedback.

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Main Claim 1 –

Direct vagal brain-to-heart innervation enables early heart-rate control

Supporting evidence

  • Cardiac innervation progresses SAP-to-atrium-to-AVP/ventricle across development
  • Cholinergic motor vagus initiates innervation; first ICN synapses heart
  • Three-stage heart–brain development adds control capabilities sequentially
Main Claim 2 –

Medial cholinergic hindbrain premotor nucleus causally controls heart rate

Main Claim 3 –

APG sympathetic neurons implement PID-like motifs shaping cardiac dynamics

Supporting evidence

  • Sympathetic SAP innervation begins variably at 7 dpf, consistent by 12
Main Claim 4 –

Vagal sensory neurons encode heart rate via phase-shifted biphasic kernel

Supporting evidence

  • Vagal sensory heart innervation matures last, yet early HR encoding exists
  • Canonical vagal sensory HR-encoding kernel is stimulus-invariant

Abstract

The early formation of sensorimotor circuits is essential for survival. While the development and function of exteroceptive circuits and their associated motor pathways are well characterized, far less is known about the circuits that convey viscerosensory inputs to the brain and transmit visceromotor commands from the central nervous system to internal organs. Technical limitations, such as the in utero development of viscerosensory and visceromotor circuits and the invasiveness of procedures required to access them, have hindered studies of their functional development in mammals. Using larval zebrafish—which are genetically accessible and optically transparent—we tracked, in vivo, how cardiosensory and cardiomotor neural circuits assemble and begin to function. We uncovered a staged program. First, a minimal efferent circuit suffices for heart-rate control: direct brain-to-heart vagal motor innervation is required, intracardiac neurons are not, and heart rate is governed exclusively by the motor vagus nerve. Within the hindbrain, we functionally localize a vagal premotor population that drives this early efferent control. Second, sympathetic innervation arrives and enhances the dynamics and amplitude of cardiac responses, as neurons in the most anterior sympathetic ganglia acquire the ability to drive cardiac acceleration. These neurons exhibit proportional, integral, and derivative–like relationships to heart rate, consistent with controller motifs that shape gain and dynamics. Third, vagal sensory neurons innervate the heart. Distinct subsets increase activity when heart rate falls or rises, and across spontaneous fluctuations, responses to aversive stimuli, and optogenetically evoked cardiac perturbations, their dynamics are captured by a single canonical temporal kernel with neuron-specific phase offsets, supporting a population code for heart rate. This temporally segregated maturation isolates three experimentally tractable regimes—unidirectional brain-to-heart communication, dual efferent control, and closed-loop control after sensory feedback engages—providing a framework for mechanistic dissection of organism-wide heart–brain circuits.

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